Queries about going to HK for Nepalese passport studying in Philippines

You need to apply for two different ones for either of the two cities and application can be done at the Chinese embassy in Philippines.

In general, you need to prepare your valid passport, application forms with a recent taken photo, your bank statement, your hotel booking confirmations, round trip tickets to HK/Macau and your itinerary in those two cities for applying the permits to the two cities.