Honduran Passport; Paris - Shanghai - Taipei with Air China and Taiwanese visa

Hello,

Can I do a transit at Shanghai Airport if I am Honduran citizen but I dont plan to leave the airport. It will be a flight with air China coming from Paris and final destination Taipei Taiwan with a connection in Shanghai. The connection is just 3 hours and I am considering this company because is at least 35% cheaper than other options.
I will have on my passport the entry permit for Taiwan..
Thanks!